Add adapt_member.sh job into the event-generator workflow.

conf/event-generator/jobs.yml

@@ -8,10 +8,14 @@ JOBS:
     WALLCLOCK: 01:00
     PLATFORM: LOCAL
 
-
   PREPARE_MEMBER:
     FILE: templates/event-generator/prepare_member.sh
     DEPENDENCIES: PREPARE_EXPERIMENT PREPARE_DATE
 
+  ADAPT_MEMBER:
+    FILE: templates/event-generator/adapt_member.sh
+    DEPENDENCIES: PREPARE_MEMBER TRANSFER_PROJECT BUILD_PYTHON_ENVIRONMENT
+
   PREPARE_NAMELIST:
-    FILE: templates/event-generator/prepare_namelist.py
+    FILE: templates/event-generator/prepare_namelist.py
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+    DEPENDENCIES: ADAPT_MEMBER RUN_ICON-1

templates/event-generator/adapt_member.sh

+#!/bin/bash
+
+#TODO:
+# - Interpolate SST forcing file from regular grid to the destination grid
+# - Integrate the SST into the analysis file
+# - Add SST climatology in the external parameter file.
+
+# Get some variables provided by autosubmit.
+WORKDIR=%HPCROOTDIR%
+PROJ_FOLDER=${WORKDIR}/proj
+
+SST_FORCING=$( basename %simulation.sea_surface_temperature_forcing% )
+INTERPOLATED_SST=whatever.nc
+DESTINATION_GRID=%simulation.dynamics_grid%
+EXTERNAL_PARAMETERS_FILE=%simulation.external_parameters_filename%
+STARTDATE=%SDATE%
+
+# Load spack
+. ${WORKDIR}/proj/platforms/common/spack_utils.sh
+load_spack "%spack.init%" "%spack.root%" "%spack.url%" "%spack.branch%" "%spack.externals%" "%spack.compiler%" "%spack.disable_local_config%" "%spack.user_cache_path%" "%spack.user_config_path%" "%spack.upstreams%"
+
+# Load dwd-icon-tools
+spack load --first dwd-icon-tools % "%spack.compiler%"
+
+
+# Interpolate SST
+source ${PROJ_FOLDER}/templates/event-generator/interpolate_sst.sh
+interpolate_SST ${DESTINATION_GRID} ${SST_FORCING} ${INTERPOLATED_SST}
+
+
+# Integrate
+#python ${sst_to_analysis_script} ${INTERPOLATED_SST}
+
+# Add SST to external parameter
+#python ${sst_to_extpar_script} ${INTERPOLATED_SST} ${EXTERNAL_PARAMETERS_FILE}
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templates/event-generator/interpolate_sst.sh

+function interpolate_SST() {
+  local GRID_FILE="$1"
+  local SST_INPUT="$2"
+  local SST_OUTPUT="$3"
+
+  remap_namelist="tmp_sst_remap.nmp"
+  cat > ${remap_namelist} << END
+
+  &remap_nml
+  in_filename = "${SST_INPUT}"
+  in_type = 1
+  out_grid_filename = "${GRID_FILE}"
+  out_filename = "${SST_OUTPUT}"
+  out_type = 2
+  out_filetype = 4
+  /
+
+  &input_field_nml
+  inputname = "T_SEA"
+  outputname = "T_SEA"
+  code=167
+
+  &input_field_nml
+  inputname = "T_SEA_CLIM"
+  outputname = "T_SEA_CLIM"
+  code=167
+
+  /
+
+  END
+
+
+  iconremap --remap_nml ${remap_namelist} -vvv
+
+
+  # Remove namelist
+  rm -f ${remap_namelist}
+
+}
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