From df8766e4fe620b319838f8cdc92f6197c6cfb455 Mon Sep 17 00:00:00 2001
From: "Takumi.Matsunobu" <Takumi.Matsunobu@physik.uni-muenchen.de>
Date: Mon, 26 Jun 2023 11:02:19 +0200
Subject: [PATCH] correction in namelist
---
conf/real-from-d2-ana/simulation.yml | 2 +-
namelists/real-from-d2-ana/icon_atmosphere.namelist | 3 ---
templates/real-from-d2-ana/prepare_date_remote.sh | 2 +-
templates/real-from-d2-ana/prepare_lbc_remote.sh | 2 +-
templates/real-from-d2-ana/prepare_namelist.py | 11 +++++++----
5 files changed, 10 insertions(+), 10 deletions(-)
diff --git a/conf/real-from-d2-ana/simulation.yml b/conf/real-from-d2-ana/simulation.yml
index 72cb077..6a4e61f 100644
--- a/conf/real-from-d2-ana/simulation.yml
+++ b/conf/real-from-d2-ana/simulation.yml
@@ -12,7 +12,7 @@ simulation:
atmosphere: "%HPCROOTDIR%/proj/namelists/real-from-d2-ana/icon_atmosphere.namelist"
# List of output file names that will be copied (Wildcards * allowed)
- output_file_names: "init_DOM01_ML_*.nc latbc_DOM01_ML_*.nc"
+ output_file_names: "idfrf*.nc"
files_to_clean: "*.nc"
initial_conditions:
diff --git a/namelists/real-from-d2-ana/icon_atmosphere.namelist b/namelists/real-from-d2-ana/icon_atmosphere.namelist
index d305145..ef9abb7 100644
--- a/namelists/real-from-d2-ana/icon_atmosphere.namelist
+++ b/namelists/real-from-d2-ana/icon_atmosphere.namelist
@@ -263,9 +263,6 @@
timedep_pert = 2
/
-&gribout_nml
- perturbationNumber = 9
-/
! ----------------------------------------------- !
! --- ICON-D2: output fields - regular grid at pressure levels --- !
diff --git a/templates/real-from-d2-ana/prepare_date_remote.sh b/templates/real-from-d2-ana/prepare_date_remote.sh
index 1246020..b1910df 100644
--- a/templates/real-from-d2-ana/prepare_date_remote.sh
+++ b/templates/real-from-d2-ana/prepare_date_remote.sh
@@ -62,5 +62,5 @@ if [ "${IC_DATA_IS_LOCAL}" != "True" ]; then
awk '{print $1}' fg_file.txt | xargs -I[] ln -sf [] .
# Change permissions to read only.
- chmod 440 ./*
+ #chmod 440 ./*
fi
\ No newline at end of file
diff --git a/templates/real-from-d2-ana/prepare_lbc_remote.sh b/templates/real-from-d2-ana/prepare_lbc_remote.sh
index 6e038f6..f172ed3 100644
--- a/templates/real-from-d2-ana/prepare_lbc_remote.sh
+++ b/templates/real-from-d2-ana/prepare_lbc_remote.sh
@@ -114,7 +114,7 @@ if [ "${LBC_DATA_IS_LOCAL}" != "True" ]; then
#cp "${LBC_SOURCE}" "${LBC_FILE}"
# Change permissions to read only.
- chmod 440 ./*
+ chmod 440 ${MEMBER_DIR}/latbc_*.grib
fi
\ No newline at end of file
diff --git a/templates/real-from-d2-ana/prepare_namelist.py b/templates/real-from-d2-ana/prepare_namelist.py
index ffb8d7d..f59f115 100644
--- a/templates/real-from-d2-ana/prepare_namelist.py
+++ b/templates/real-from-d2-ana/prepare_namelist.py
@@ -41,6 +41,9 @@ first_guess_filename = (
analysis_filename = RUNDIR / f"an_R19B07.{Chunk_START_DATE.strftime('%Y%m%d%H%M')}00_an.{MEMBER[1:]}"
analysis_inc_filename = RUNDIR / f"an_R19B07.{Chunk_START_DATE.strftime('%Y%m%d%H%M')}00_inc.{MEMBER[1:]}"
+
+boundary_filename = RUNDIR / f"latbc_<dddhh>.{MEMBER}.grib"
+
# Read custom namelist parameters from configuration
atmosphere_namelist_string = """
%atmosphere_namelist%
@@ -68,12 +71,12 @@ atmosphere_namelist_replacements = {
"extpar_filename": "%simulation.external_parameters_filename%",
},
"initicon_nml": {
- "dwdfg_filename": first_guess_filename,
- "dwdana_filename": analysis_inc_filename,
+ "dwdfg_filename": str(first_guess_filename),
+ "dwdana_filename": str(analysis_inc_filename),
},
"limarea_nml": {
- "latbc_filename": "./icbc/M031/latbc_<dddhh>.grib",
- "latbc_boundary_grid": "icon_grid_0047_R19B07_L_lbc.nc",
+ "latbc_filename": str(boundary_filename),
+ "latbc_boundary_grid": "%simulation.lateral_boundary_grid_filename%",
},
"nwp_phy_nml": {
"psp_rnd_seed": int(MEMBER[1:]),
--
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